Nomenclature for Factors of the HLA System
September 2015
Compiled by Steven G. E. Marsh for the WHO Nomenclature Committee for Factors of the HLA System.
Published In:
- Tissue Antigens (2015) 86:469-73
- Human Immunology (2015) 76:878-81
- International Journal of Immunogenetics (2016) 43:60-64
The following sequences have been submitted to the Nomenclature Committee since the August 2015 nomenclature update and, following agreed policy, have been assigned official allele designations. Full details of all sequences will be published in a forthcoming report.
Below are listed the newly assigned sequences (Table 1) and confirmations of previously reported sequences (Table 2). The accession number of each sequence is given and these can be used to retrieve the sequence files from the EMBL, GenBank or DDBJ data libraries. Although accession numbers have been assigned by the data-libraries and most sequences are already available, there is still the possibility that an author may not yet have allowed the sequence to be released; in such a case you will have to contact the submitting author directly. Additional information pertaining to new sequences is often included in the publications describing these alleles; a listing of recent publications that describe new HLA sequences is given in Table 3.
All new and confirmatory sequences should now be submitted directly to the WHO Nomenclature Committee for Factors of the HLA System via the IMGT/HLA Database using the sequence submission tool provided (2). The IMGT/HLA Database may be accessed via the world wide web at : http://ww.ebi.ac.uk/imgt/hla/.
Table 1: New Sequences
| Sequence | Cell identification | Accession number | Submitting author |
|---|---|---|---|
| A*01:01:73 | BY01191 | KJ155021 | Carolyn K Hurley, Washington DC, USA |
| A*01:52:02N | HG00010659 | KT235643 | Histogenetics, Ossining, USA |
| A*01:196 | RMC33692 | LN878289 | Maria Loginova, Kirov, Russia |
| A*02:06:01:03 | AN300119 | LN877330 | Steven GE Marsh, London, United Kingdom |
| A*02:591 | HG00010652, HG00010653 | KT235645, KT235646 | Histogenetics, Ossining, USA |
| A*02:592 | HG00010667 | KT282146 | Histogenetics, Ossining, USA |
| A*02:593 | HG00010668 | KT315588 | Histogenetics, Ossining, USA |
| A*02:594 | HG00010669 | KT282147 | Histogenetics, Ossining, USA |
| A*02:595 | HG00010670 | KT355336 | Histogenetics, Ossining, USA |
| A*02:596 | HG00010672 | KT282144 | Histogenetics, Ossining, USA |
| A*02:597 | HG00010673, HG00010674 | KT438912, KT355334 | Histogenetics, Ossining, USA |
| A*02:598 | HG00010675 | KT282142 | Histogenetics, Ossining, USA |
| A*03:89:02 | AN300102 | LN877296 | Steven GE Marsh, London, United Kingdom |
| A*03:231 | AN300101 | LN877295 | Steven GE Marsh, London, United Kingdom |
| A*03:232 | HG00010660 | KT282143 | Histogenetics, Ossining, USA |
| A*03:233 | HG00010661 | KT355333 | Histogenetics, Ossining, USA |
| A*03:234Q | NT01265 | KT591468 | Carolyn K Hurley, Washington DC, USA |
| A*11:228 | HG00010654 | KT315590 | Histogenetics, Ossining, USA |
| A*11:229 | 0270904451 | KT725248 | Wangxia Li, Wuhan, China |
| A*24:322 | HG00010655 | KT235644 | Histogenetics, Ossining, USA |
| A*24:323N | HG00010657 | KT361885 | Histogenetics, Ossining, USA |
| A*25:33 | HG00010651 | KT361888 | Histogenetics, Ossining, USA |
| A*26:01:39 | AN300104 | LN877301 | Steven GE Marsh, London, United Kingdom |
| A*26:117 | RMC33276 | LN878290 | Maria Loginova, Kirov, Russia |
| A*29:02:01:03 | AN300116 | LN877321 | Steven GE Marsh, London, United Kingdom |
| A*29:82 | HG00010650 | KT355330 | Histogenetics, Ossining, USA |
| A*31:102 | HG00010648 | KT361886 | Histogenetics, Ossining, USA |
| A*31:103 | HG00010649 | KT315587 | Histogenetics, Ossining, USA |
| A*32:01:23 | 26896 | KT633955 | Antonio Balas, Madrid, Spain |
| A*32:78 | HG00010664 | KT282148 | Histogenetics, Ossining, USA |
| A*32:79 | HG00010666 | KT282145 | Histogenetics, Ossining, USA |
| A*74:01:02 | 1706-12 | HE995761 | Florian Emmerich, Freiburg, Germany |
| A*74:01:03 | BY01222 | KJ623746 | Carolyn K Hurley, Washington DC, USA |
| A*74:26 | HG00010665 | KT361889 | Histogenetics, Ossining, USA |
| B*08:26:03 | AN300109 | LN877308 | Steven GE Marsh, London, United Kingdom |
| B*08:156 | HG00010682 | KT361892 | Histogenetics, Ossining, USA |
| B*15:01:01:04 | AN300106 | LN877305 | Steven GE Marsh, London, United Kingdom |
| B*15:03:01:02 | NT01261 | KT591467 | Carolyn K Hurley, Washington DC, USA |
| B*15:371 | HG00010677 | KT282155 | Histogenetics, Ossining, USA |
| B*15:372 | HG00010689 | KT361891 | Histogenetics, Ossining, USA |
| B*15:373 | HG00010698 | KT235652 | Histogenetics, Ossining, USA |
| B*15:374 | SZ-165 | KT716016 | Hong-Yan Zou, Shenzhen, China |
| B*18:12:02 | HG00010680 | KT235655 | Histogenetics, Ossining, USA |
| B*35:300 | NT01270 | KT716041 | Carolyn K Hurley, Washington DC, USA |
| B*37:57 | HG00010679 | KT235648 | Histogenetics, Ossining, USA |
| B*39:01:01:04 | QMH0001 | HG329530 | Janette Kwok, Pokfulam Road, Hong Kong |
| B*40:317 | 0271405863 | KT725247 | Wangxia Li, Wuhan, China |
| B*41:41 | DKMS-LSL-B-492 | LN871067 | DKMS Life Sciences Lab, Dresden, Germany |
| B*44:03:01:02 | AN300130 | LN877359 | Steven GE Marsh, London, United Kingdom |
| B*44:03:30 | HG00010683 | KT282156 | Histogenetics, Ossining, USA |
| B*44:229 | AN300106 | LN877304 | Steven GE Marsh, London, United Kingdom |
| B*44:230 | AN300110 | LN877309 | Steven GE Marsh, London, United Kingdom |
| B*44:231 | HG00010678 | KT355343 | Histogenetics, Ossining, USA |
| B*44:232 | HG00010684 | KT235654 | Histogenetics, Ossining, USA |
| B*44:233 | HG00010685 | KT235647 | Histogenetics, Ossining, USA |
| B*44:234 | HG00010686 | KT438906 | Histogenetics, Ossining, USA |
| B*47:01:01:03 | AN300119 | LN877333 | Steven GE Marsh, London, United Kingdom |
| B*51:06:03 | HG00010696 | KT315596 | Histogenetics, Ossining, USA |
| B*51:194 | HG00010695 | KT235650 | Histogenetics, Ossining, USA |
| B*51:195 | HG00010697 | KT438908 | Histogenetics, Ossining, USA |
| B*52:54 | AN300134 | LN877369 | Steven GE Marsh, London, United Kingdom |
| B*52:55 | HG00010688 | KT235651 | Histogenetics, Ossining, USA |
| B*52:56 | 0270904593 | KT713741 | Wangxia Li, Wuhan, China |
| B*53:41 | HG00010687 | KT315594 | Histogenetics, Ossining, USA |
| B*56:01:01:03 | AN300118 | LN877328 | Steven GE Marsh, London, United Kingdom |
| B*57:04:02 | HG00010692 | KT355341 | Histogenetics, Ossining, USA |
| B*57:67:02 | HG00010690 | KT355344 | Histogenetics, Ossining, USA |
| B*57:80 | HG00010693 | KT355340 | Histogenetics, Ossining, USA |
| C*03:302 | FA1206 | LN875781 | Vincent Elsermans, Lille cedex, France |
| C*03:303 | KM-DZ35 | LN850317 | Jue Wang, Chengdu, China |
| C*04:217N | LUMC-C-111 | LN879372 | Jacqy DH Anholts, Leiden, The Netherlands |
| C*05:124 | 216332 | LN879398 | Maria Peixoto, Porto, Portugal |
| C*06:166 | H1885 | KM051508 | Xiaojing Wang, Tianjin, China |
| C*07:01:01:04 | AN300134 | LN877368 | Steven GE Marsh, London, United Kingdom |
| C*07:458 | AN300114 | LN877317 | Steven GE Marsh, London, United Kingdom |
| C*07:459 | LUMC-C-116 | LN879377 | Jacqy DH Anholts, Leiden, The Netherlands |
| C*08:125 | SZ-166 | KT716015 | Hong-Yan Zou, Shenzhen, China |
| C*12:03:01:03 | DKMS-LSL-C-493 | LN871454 | DKMS Life Sciences Lab, Dresden, Germany |
| C*12:167 | LUMC-C-115 | LN879376 | Jacqy DH Anholts, Leiden, The Netherlands |
| C*17:01:01:04 | AN300120 | LN877338 | Steven GE Marsh, London, United Kingdom |
| C*17:01:01:05 | NT01260 | KT591466 | Carolyn K Hurley, Washington DC, USA |
| DRB1*01:02:12 | HG00010784 | KT282193 | Histogenetics, Ossining, USA |
| DRB1*01:72 | HG00010785 | KT282192 | Histogenetics, Ossining, USA |
| DRB1*03:125 | HG00010775 | KT361908 | Histogenetics, Ossining, USA |
| DRB1*04:02:05 | HG00010768, HG00010769 | KT355352, KT361909 | Histogenetics, Ossining, USA |
| DRB1*04:03:11 | HG00010771 | KT235674 | Histogenetics, Ossining, USA |
| DRB1*04:04:10 | HG00010772 | KT315614 | Histogenetics, Ossining, USA |
| DRB1*04:94:02N | HG00010770 | KT315612 | Histogenetics, Ossining, USA |
| DRB1*04:202 | HG00010773 | KT282191 | Histogenetics, Ossining, USA |
| DRB1*09:27 | HG00010767 | KT235673 | Histogenetics, Ossining, USA |
| DRB1*11:193 | HG00010774 | KT355350 | Histogenetics, Ossining, USA |
| DRB1*11:194 | HG00010781 | KT235672 | Histogenetics, Ossining, USA |
| DRB1*13:209 | HG00010777 | KT438915 | Histogenetics, Ossining, USA |
| DRB1*13:210 | HG00010778 | KT355356 | Histogenetics, Ossining, USA |
| DRB1*14:168 | HG00010782 | KT355351 | Histogenetics, Ossining, USA |
| DRB1*15:02:17 | HG00010766 | KT282187 | Histogenetics, Ossining, USA |
| DRB1*16:01:10 | HG00010765 | KT355349 | Histogenetics, Ossining, USA |
| DRB3*01:17 | LUMC-DRB3-112 | LN879373 | Jacqy DH Anholts, Leiden, The Netherlands |
| DRB4*01:10 | LUMC-DRB4-114 | LN879375 | Jacqy DH Anholts, Leiden, The Netherlands |
| DRB5*01:16 | LUMC-DRB5-113 | LN879374 | Jacqy DH Anholts, Leiden, The Netherlands |
| DQB1*03:207 | HG00010746 | KT282184 | Histogenetics, Ossining, USA |
| DQB1*03:208 | HG00010748 | KT282185 | Histogenetics, Ossining, USA |
| DQB1*03:209 | HG00010749 | KT361902 | Histogenetics, Ossining, USA |
| DQB1*03:210 | HG00010753 | KT361903 | Histogenetics, Ossining, USA |
| DQB1*03:211 | HG00010755, HG00010756 | KT361907, KT282183 | Histogenetics, Ossining, USA |
| DQB1*03:212 | HG00010757 | KT315611 | Histogenetics, Ossining, USA |
| DQB1*03:213N | HG00010758 | KT438913 | Histogenetics, Ossining, USA |
| DQB1*03:214 | HG00010759 | KT282186 | Histogenetics, Ossining, USA |
| DQB1*03:215 | HG00010762 | KT361905 | Histogenetics, Ossining, USA |
| DQB1*06:14:03 | HG00010760, HG00010761 | KT361899, KT361901 | Histogenetics, Ossining, USA |
| DQB1*06:146:02 | HG00010764 | KT355346 | Histogenetics, Ossining, USA |
| DQB1*06:194 | HG00010745 | KT315607 | Histogenetics, Ossining, USA |
| DQB1*06:195 | HG00010747 | KT235661 | Histogenetics, Ossining, USA |
| DQB1*06:196 | HG00010750 | KT315608 | Histogenetics, Ossining, USA |
| DQB1*06:197 | HG00010763 | KT282181 | Histogenetics, Ossining, USA |
| DPA1*01:03:05 | BY01256 | KT716047 | Carolyn K Hurley, Washington DC, USA |
| DPA1*02:06 | BY01260, BY01261 | KT716048 | Carolyn K Hurley, Washington DC, USA |
| DPB1*494:01 | HG00010786 | KT315615 | Histogenetics, Ossining, USA |
| DPB1*495:01 | HG00010787 | KT235666 | Histogenetics, Ossining, USA |
| DPB1*496:01 | HG00010788 | KT315619 | Histogenetics, Ossining, USA |
| DPB1*497:01 | HG00010790 | KT361916 | Histogenetics, Ossining, USA |
Table 2: Confirmatory Sequences
| Sequence | Cell identification | Accession number | Submitting author |
|---|---|---|---|
| A*02:02:01:01 | AN300120 | LN877336 | Steven GE Marsh, London, United Kingdom |
| A*02:05:01 | AN300133 | LN877365 | Steven GE Marsh, London, United Kingdom |
| A*03:01:01:05 | AN300116, AN300122 | LN877322, LN877341 | Steven GE Marsh, London, United Kingdom |
| A*03:02:01 | AN300128 | LN877355 | Steven GE Marsh, London, United Kingdom |
| A*03:204 | HG00010662 | KT355331 | Histogenetics, Ossining, USA |
| A*11:183 | AN300103 | LN877300 | Steven GE Marsh, London, United Kingdom |
| A*23:18 | TMO27016 | KR106298 | Antonio Balas, Madrid, Spain |
| A*24:252N | DKMS-LSL-A-494 | LN873232 | DKMS Life Sciences Lab, Dresden, Germany |
| A*25:01:01 | AN300111, AN300119 | LN877312, LN877331 | Steven GE Marsh, London, United Kingdom |
| A*29:02:01:01 | AN300126 | LN877349 | Steven GE Marsh, London, United Kingdom |
| A*30:02:01:01 | AN300112 | LN877313 | Steven GE Marsh, London, United Kingdom |
| A*33:01:01 | AN300114, AN300120, AN300130 | LN877318, LN877337, LN877358 | Steven GE Marsh, London, United Kingdom |
| A*80:01:01:02 | AN300131 | LN877360 | Steven GE Marsh, London, United Kingdom |
| B*07:06 | AN300116 | LN877324 | Steven GE Marsh, London, United Kingdom |
| B*08:01:01 | AN300128 | LN877354 | Steven GE Marsh, London, United Kingdom |
| B*08:33 | AN300117 | LN877327 | Steven GE Marsh, London, United Kingdom |
| B*08:79 | 60747743 | KT768089 | Antonio Balas, Madrid, Spain |
| B*14:33 | AN300105 | LN877302 | Steven GE Marsh, London, United Kingdom |
| B*15:11:01 | TER-1327 | LN877334 | Steven GE Marsh, London, United Kingdom |
| B*27:02:01 | BRUG | LN877310 | Steven GE Marsh, London, United Kingdom |
| B*27:52 | 25645 | KT387677 | Francisco de Paula Sanchez Gordo, Malaga, Spain |
| B*35:02:01 | AN300124, AN300128 | LN877346, LN877353 | Steven GE Marsh, London, United Kingdom |
| B*37:35 | AN300108 | LN877307 | Steven GE Marsh, London, United Kingdom |
| B*38:01:01 | AN300129 | LN877357 | Steven GE Marsh, London, United Kingdom |
| B*39:01:01:03 | AN300127 | LN877351 | Steven GE Marsh, London, United Kingdom |
| B*39:06:02 | AN300101 | LN877294 | Steven GE Marsh, London, United Kingdom |
| B*39:10:01 | AN300120 | LN877339 | Steven GE Marsh, London, United Kingdom |
| B*40:99 | 60748511 | KT768090 | Antonio Balas, Madrid, Spain |
| B*40:130:02 | AN300133 | LN877367 | Steven GE Marsh, London, United Kingdom |
| B*40:309 | NT01268 | KT716039 | Carolyn K Hurley, Washington DC, USA |
| B*44:03:01:01 | AN300117, AN300132 | LN877326, LN877362 | Steven GE Marsh, London, United Kingdom |
| B*44:03:02 | AN300103 | LN877299 | Steven GE Marsh, London, United Kingdom |
| B*44:64:02 | NT01269 | KT716040 | Carolyn K Hurley, Washington DC, USA |
| B*48:01:01 | HS67 | LN877371 | Steven GE Marsh, London, United Kingdom |
| B*49:01:01 | AN300124 | LN877347 | Steven GE Marsh, London, United Kingdom |
| B*50:01:01 | AN300133 | LN877366 | Steven GE Marsh, London, United Kingdom |
| B*51:148 | NT01267 | KT591470 | Carolyn K Hurley, Washington DC, USA |
| B*51:151 | 2014090901 | KT387676 | Adolfo Eiras, Santiago de Compostela, Spain |
| B*52:01:01:02 | AN300121, AN300131 | LN877340, LN877361 | Steven GE Marsh, London, United Kingdom |
| B*52:31:01 | AN300107 | LN877306 | Steven GE Marsh, London, United Kingdom |
| B*53:01:01 | AN300114 | LN877319 | Steven GE Marsh, London, United Kingdom |
| B*55:01:01 | AN300102 | LN877297 | Steven GE Marsh, London, United Kingdom |
| B*57:05 | AN300116 | LN877325 | Steven GE Marsh, London, United Kingdom |
| B*59:01:01:02 | TER-1327 | LN877335 | Steven GE Marsh, London, United Kingdom |
| B*67:01:01 | HS67 | LN877372 | Steven GE Marsh, London, United Kingdom |
| C*04:01:01:06 | AN300106, AN300124, AN300128 | LN877303, LN877344, LN877352 | Steven GE Marsh, London, United Kingdom |
| C*04:01:44 | AN300114 | LN877316 | Steven GE Marsh, London, United Kingdom |
| C*04:10 | AN300118 | LN877329 | Steven GE Marsh, London, United Kingdom |
| C*04:145 | AN300113 | LN877315 | Steven GE Marsh, London, United Kingdom |
| C*05:98 | AN300115 | LN877320 | Steven GE Marsh, London, United Kingdom |
| C*06:76:01 | AN300119 | LN877332 | Steven GE Marsh, London, United Kingdom |
| C*07:04:01 | AN300125 | LN877348 | Steven GE Marsh, London, United Kingdom |
| C*07:06 | AN300103 | LN877298 | Steven GE Marsh, London, United Kingdom |
| C*07:18 | AN300127 | LN877350 | Steven GE Marsh, London, United Kingdom |
| C*07:412 | NT01266 | KT591469 | Carolyn K Hurley, Washington DC, USA |
| C*08:03:01 | HS67 | LN877370 | Steven GE Marsh, London, United Kingdom |
| C*08:92 | AN300112 | LN877314 | Steven GE Marsh, London, United Kingdom |
| C*12:59 | BY01269 | KT735123 | Carolyn K Hurley, Washington DC, USA |
| C*16:01:01:01 | AN300123 | LN877343 | Steven GE Marsh, London, United Kingdom |
| C*16:04:01 | AN300124, AN300129 | LN877345, LN877356 | Steven GE Marsh, London, United Kingdom |
| C*18:02 | AN300116 | LN877323 | Steven GE Marsh, London, United Kingdom |
| DQB1*06:125 | DKMS-LSL-DQB1-491 | LN871065 | DKMS Life Sciences Lab, Dresden, Germany |
| DPA1*01:03:01:02 | BY01257 | KT716045 | Carolyn K Hurley, Washington DC, USA |
| DPA1*01:03:01:02 | BY01264 | KT716052 | Carolyn K Hurley, Washington DC, USA |
| DPA1*01:03:01:03 | BY01266 | KT735120 | Carolyn K Hurley, Washington DC, USA |
| DPA1*01:03:01:04 | BY01267 | KT735121 | Carolyn K Hurley, Washington DC, USA |
| DPA1*02:01:01 | BY01265 | KT725627 | Carolyn K Hurley, Washington DC, USA |
| DPA1*02:01:02 | BY01265 | KT725628 | Carolyn K Hurley, Washington DC, USA |
| DPA1*02:01:08 | BY01259 | KT716042 | Carolyn K Hurley, Washington DC, USA |
Table 3: Recently Published Sequences
| Sequence | References |
|---|---|
| A*02:07:01 | (3) |
| A*02:10 | (3) |
| A*02:512 | (4) |
| A*24:02:90 | (5) |
| B*07:02:45 | (6) |
| B*07:249 | (7) |
| B*14:02:09 | (6) |
| B*39:01:15 | (8) |
| B*40:229 | (9) |
| B*40:285 | (6) |
| B*40:303 | (6) |
| B*41:29 | (6) |
| C*03:279 | (6) |
| C*12:125 | (6) |
| C*14:02:13 | (10) |
| C*15:72 | (10) |
| C*15:74 | (10) |
| C*15:96Q | (11) |
| DRB1*13:204 | (12) |
| DRB1*14:84 | (13) |
| DRB3*01:16 | (14) |
| DQB1*05:10 | (15) |
| DQB1*06:127 | (16) |
| MICA*019:01 | (17) |
| MICA*027 | (17) |
| MICA*045 | (17) |
| MICA*078 | (18) |
References:
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