HLADB-2.28.0-January 2010 HLA-K Genomic Nucleotide Sequence Alignments Sequences Aligned: 15 January 2010 Steven GE Marsh, Anthony Nolan Research Institute. 5' UTR gDNA -300 | K*01010101 AGGAGGAGCG GGGTCAGGGC GAAGTCCTAT GGCCCCAGGC GTGGCTCTCA GGGTTTCAGG CCCCGAAGGC GATGTATTGA TTGGGGAGGC CCAGGGTTGG K*01010102 ---------- ---------- ----C----- ---------- ------T--- ---------- ---------- -T-------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ----C----- ---------- ------T--- ---------- ---------- -T-------- ---------- ---------- gDNA -200 | K*01010101 GGATTCCCCA TCTCCGCAGT TTCTCTTCTC CCTCTCCCAA CTTATGTAGG GTCCTTCTTC CTGGACACTC AGGATGTGGA CTCAGTTCTC ACCCCCATTT K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --T------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --T------- gDNA -100 | K*01010101 GGTGTCGGGT TTCTAGCGAA GCCAATCGGC GTCGCTGGGG TCCCTGTTCC AGAAGTCCCC GCGAACCCAT TGGGACTCAG ATTCTCCCCA GACGCCGAGG K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----T---- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ------A--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------C ---------- ---------- T--------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----T---- ---------- ---------- | Exon 1 Exon 1 | Intron 1 gDNA | 1 | | | K*01010101 | ATGGGGTCAT GGCGTCCCGA ACCCTCCTCC TGCTGCTCTT GGGGGCCCTG GCCCTGACCG AGACCTGGGC GG | GTGAGTGC GGGATCCGGA GGGAAATGGC K*01010102 | ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- K*01010103 | ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- K*01010104 | ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- K*0102 | -------T-- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- K*0103 | ---------- --------A- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- gDNA 101 | K*01010101 CTCTGCGGGG AGGAGGTAGG GGCCCGCGCA CTGGGGCGCA GGACCCGGGG AGCAGCGCAA GGAGGAGGGT CGGACGGGTC TCAGCCCCTC CTCGCCCCCA K*01010102 ---------- -----C---- ---------- ---------- ---------- ---C--T--- ---------- ---------- ---------- ---------- K*01010103 ---------- -----C---- ---------- ---------- ---------- ---C--T--- ---------- ---------- ---------- ---------- K*01010104 ---------- -----C---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- -----C---- ---------- ---------- ---------- ---------- ---------- ----T----- ---------- ---------- K*0103 ---------- -----C---- ---------- ---------- ---------- ---C--T--- ---------- ---------- ---------- ---------- Intron 1 | Exon 2 gDNA 201 | | | K*01010101 G | GTACCCACT CCATAAGGTA TTTCAGCACC GCCGTGTCCC GGCCGGGTCG CGGGGAGCCC CGGTACATCG CAGTGGGCTA CGTGGACGAC ACGCAGTTCG K*01010102 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 - | --T------ ---------- G--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 - | --T------ ---------- G--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 - | --T------ ---------- G--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 - | --------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 301 | K*01010101 TGCGGTTCGA CAGCGACGCG GCGACTCCGA GGATGTAGCC GCAGTCGCCG TGGTTGGAGC AGGAGGGACC GGAGTATTGG GACCGGAGCA CACGGAACAT K*01010102 ---------- ---------- ---------- ---------- ----G---A- ---------- ----T----- ---------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---C------ ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ----G----- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ----G----- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ----G----- ---------- ---------- ---------- ---------- ---C------ Exon 2 | Intron 2 gDNA 401 | | | K*01010101 CAGGCCCGCG CACAGACTGA CAAGAGTGAA CCTGCCCATG CCGCGCCGCT ACTACCACCA GAGCTAGGCC G | GTGAATGAC CCCGGCCTGG GGCGAAGGTC K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- ---------- gDNA 501 | K*01010101 ACGACCCCTC CTCATCCCCC ACGGACGTCC CGGGTCCCCC CCGCGAGTCT CCGGCTCCAA GATCCACCCC GAGGCTGCGG GACCCGCCAG ATCCTCGACC K*01010102 ---------- ---------- ---------- ---------- ---------- --------G- ---------- ---------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- --------G- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- --------G- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- --------G- --C------- ---------- ---------- ---------- K*0103 ---------- ---------- -------C-- ---------- ---------- --------G- ---------- ---------- ---------- ---------- gDNA 601 | K*01010101 CGGGAGAGGC CCAGGCGCCT TTACCAGGTT TCATTTTCCG TTTAGGCCAA AATCCCCGCG GGTTGGTCGG GGCGGGGGCG GGGCTCGGTG GGCGGGGCTG K*01010102 ---------- ---------- -------A-- --------A- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 ---------- -----A-T-- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- -------A-- --------A- ---------- ---------- ---------- ---A------ ---------- -------T-- K*0102 ---------- ---------- ---------- --------A- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- -----A---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 2 | Exon 3 gDNA 701 | | | K*01010101 ACCGCGGGGG CGGGGCCAG | G GTCTAACACC CTCCAGATAA TGTATGGCTG CGACTTGGGG CTGGAAGGGC GCCTCCTCCG CGGGTATGAA CAGCACGCCA K*01010102 --A------- --------- | - ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- K*01010103 ---------- --------- | - ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 --A------- -------T- | - --------A- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 --A------- --------- | - ---------- ---------- ---------- -----C---- ------C--- ---------- ---------- ---------- K*0103 --A------- --------- | - ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 801 | K*01010101 ACGATGGCAA GGATTACATA GCCCGGAACT AGGACCTGCG CTCCTGGACC GCGGCGGACA TGGCGGCTCA GATCACCAAG CGCAAGTGGG AGGCAGAAGA K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---A------ ---------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----T---- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Exon 3 | Intron 3 gDNA 901 | | | K*01010101 ATTTGCAGAG CAGATCAGGG CCTACCTGGA GGGCACGTGC GTGGAGAGGC TCGCAGACAC CTGGAGAACG GGAAGGAGAC GCTGCAGCTC ACGG | GTACCA K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------T ---------- ---- | ------ K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --T- | ------ K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------T ---------- ---- | ------ K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------T ---------- ---- | ------ K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ gDNA 1001 | K*01010101 GGGAACACAA GACGCCTCCC TGATCGCCTG TAGATCTCCT GGGCTGGCTT CCCACAAAGA GAGAAGGAAA ATGGGACCAA CACTAGAATG TCGTCCTCTC K*01010102 ---------- ----T----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 ---------- ----T----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ----T----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ----T----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ----T----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1101 | K*01010101 TCTGGTCCTG AGGGAGAGGA ATCCTCCTGG GTTTCCAGAT CCTGTACAAG AGAGTGACTC TGAGGGTCTG CCCTGCTCTC TGATACAATT AAGGGATGAA K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---A------ ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1201 | K*01010101 ATCTCTGAGG AAATGAAGGG AAGACAATCC CTGGAATACT GATGAGGGGT TCCCTTTGAC ACCAGCAGCA GCCTTGGGCC CCGTTACTTT TCCCCTCAGG K*01010102 ---------- ---------- ---------- ---A------ ---------- ---------- --TG------ ---------- ---------- ---T------ K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---T------ K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---T------ K*0103 ---------- ---------- ---------- ---------- ---------- ---------- --TG------ ---------- ---------- ---T------ gDNA 1301 | K*01010101 CCTTGTTCTC TGCTTTACAC TCAATGTGTG TGGGGGTCTG AGTCCAGCTC TTCTGAGTCC CTCAGCCTCC ACTCAGGTCA GGACCAGAAG TCACTGTTCC K*01010102 -----C---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- A--------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ------A--- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- --------G- ---------- ---------- ---------- K*0103 -----C---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1401 | K*01010101 CTCCTCAGGG ACTGGAATTT TCCACGGAAT TCGGAGATTA TCCCAGATAC CTGTGTCCAG GTTGGTGTCT GGGTTCTGTG CTCCCTTCCC CACCCCAGGT K*01010102 ---------- ---A------ --------.. -A-------- ------G--- ---------- -----C---- ---------- ---------- ---------- K*01010103 ---------- ---A------ ---------. -A-------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---A------ --------.. -A-------- ------G--- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---A------ --------.. -A-------- ------G--- ---------- -C-------- ---------- ---------- ---------- K*0103 ---------- ---A------ --------.. -A-------- ------G--- ---------- -----C---- ---------- ---------- ---------- Intron 3 | Exon 4 gDNA 1501 | | | K*01010101 GTCCTGTCCA TTCTCAGGAT GGCCACATGC GTGCTGCTGG AGTGTCTCAT GAGAGATGCA AAGTGCCTGA ATTTTCTGAC ACTTCCTGTT AG | A...CCTC K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- T--------- -- | -..C--C- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -..C--C- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- T--------- -- | -CA.--C- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- T--------- -- | -CAC--C- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- T--------- -- | -.CC--C- gDNA 1598 | K*01010101 TCCCCCAGAC ACATATGATC CACCATTCCG TCTCTGACTA TAAGGCCACC CTGAGGTGCT GGGCCCTGGG CTTCTACCCT GTGGAGATCA CACTGGCCTG K*01010102 C-A--A---- ---------- ---------A ---------- ---------- ---------- ---------- ---------- ---------- -----A---- K*01010103 G--------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----A---- K*01010104 C-T--A---- ---------- ---------A ---------- ---------- ---------- ---------- ---------- ---------- -----AG--- K*0102 C--G-A---- ---------- ---------A ---------- ---------- ---------- ---------- ---------- A--------- -----AG--- K*0103 C----A---- ---------- ---------- ---------- ---------- -----A---- ---------- ---------- ---------- -----A---- gDNA 1698 | K*01010101 GCAGCAGGAT GGAGAGGACC AGACTCGGGA CATGGAGCTT CTAGAGACCA GGCCTGCAGG GGATGGAACC TTCCAGAAGT GGGCAGCTGT GGTGGTGCCT K*01010102 ---------- ---------- ---------- ---------- G--------- ---------- --------A- ---------- ---------- ---------- K*01010103 ---------- ---------- -----A---- ---------- G--------- ---------- ---------- ---------- ---------- ---------- K*01010104 ------A--- ---------- ---------- ---------- G--------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- -A-------- ---------- ---------- G--------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ------A--- ---------- G--------- ---------- --------A- ---------- ---------- ---------- Exon 4 | Intron 4 gDNA 1798 | | | K*01010101 TCTGGAGAGG AACAGAGATA CCCGTGCCAT GTGCAGCATG AGGGGTTGCC CAAGCCCCTC ACCCTGAGAT GGG | GTAAGGC AGGAGATGAG TGGAGGGGGG K*01010102 ---------- ---------- -AT------- ---------- ---------- ---------- ---------- --A | --T---T ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- --- | ------- ---------- ---------- K*01010104 ---------- ---------- -AT------- ---------- ---------- -G-------- ---------- --- | ------- -A-----T-- ---------- K*0102 ---------- ------..-- -AT------- ---------- ---------- -G-------- ---------- --- | ------- -A-----T-- ---------- K*0103 ---------- ---------- -AT------- ---------- ---------- ---------- ---------- --A | ------- ---------- ---------- gDNA 1898 | K*01010101 G.TCATGTCT CTTAGG.AAA GCAGGAGCCT CTCTGGAGAA CTTCAGCAGG GTCGGTGCTG GGGGCTGAGG GTCAGGGACG CTCACCTTCC CCTTTTTTCC K*01010102 -.-------- ------G--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 -.-------- ------G--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 -G-------- ------T--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 -.-------- ------T--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 -.-------- ------G--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 4 | Exon 5 gDNA 1996 | | | K*01010101 CAG | AGCAGTC TTCTCAGCCC ACCATCCCCA TCGTGGGTAT CGTTGCTGGC CTGGTTCTCC TTGGAGCTGT AGTCACTGGA GCTGTGGTTT CTGCTGTGAT K*01010102 --- | ------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 --- | ------- ---------- ---------- -------C-- -A-------- ---------- ---------- ---------- ---------- ---------- K*01010104 --- | ------- ---------- ---------- -------C-- ----A----- ---------- ---------- ---------- ---------- ---------- K*0102 --- | ------- ---------- ---------- -------C-- ----A----- ---------- ---------- ---------- ---------- ---------- K*0103 --- | ------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Exon 5 | Intron 5 gDNA 2096 | | | K*01010101 GTGCAGGAAG AAGAACTCAG | GTAAGGAATG GATGAGGAGT GGGGTCTGAG ATTTCTTGTC CCACTGAGGG TTTCAAGCCC CAGTTAGAAG TGTGTCCTGC K*01010102 ---------- ---------- | ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 ---------- ---------- | ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- | ---------- ---------- ---------- ---------- ---------- ---------- ---------- C--------- K*0102 ---------- ---------- | ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- --...----- | ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2196 | K*01010101 CTGGTTACTG GGAAGCACCA TCCACACTCA TGGGCCTACC CAGCCTGGGC CCTGTGTGCC AGCACTTACT CTTTTGTAAA GCACCTGTGA CAATGAAGGA K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 ---------- ---------- ---------- -----T---- ---------- A--------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --T------- K*0102 ---------- ---------- ---------- ---------- ---------- ---C------ ---------- ---------- ---------- --C------- K*0103 ---------- ---------- ---------- ---------- -------C-- ---------- ---------- ---------- ---------- ---------- gDNA 2296 | K*01010101 CAGATTTATC ACCTTGATGA TTATGATGAT GGGGACCTGA TCCCAGCAGT CACAAGTCAC AGGGGAAGGT CCCTGCTGAG GACAGACCTC AGGAGGGCAG K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2396 | K*01010101 TTGGTCCAGG ACCCACACCT GCTTTCCTCA TGTTTCCTGA TCCTGTCCTA GATCAGCAGT TACACTTTCA GGAAACTTCT CTGGGATCAA AGGCTA..GG K*01010102 -----T---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --A------- ------TA-- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------..-- K*01010104 -----T---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --A------- ------..-- K*0102 ---------- ---------- --------T- ---------- ---------G ---------- ---------- ---------- ---------- ------..-- K*0103 -----T---- ---------- ---------- ---------- ---------- ---------- ---------- ---------- --A------- ------..-- Intron 5 | Exon 6 Exon 6 | Intron 6 gDNA 2494 | | | | | K*01010101 GGGTTTGTTT AGGGCCGTAT GGCCCTGACT CCTTTCTGGC CTCTCATAGG ACATTTTCTT CCCACAG | ATA GAGTGAGCTA CTCTGAAGCT GCAA | GTAAGT K*01010102 ---------- ---------- ---------- ---------- ----T----- ---------- ------- | --- ---------- ---------- ---- | ------ K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ------- | --- ---------- ---------- ---- | ------ K*01010104 ---------- ---------- ---------- ---------- ----T----- ---------- ------- | --- ---------- ---------- ---- | ------ K*0102 ---------- ---------- ---------- ---------- ---------- ---------- ------- | --- ---------- ---------- ---- | ------ K*0103 ---------- ---------- ---------- ---------- ----T----- ---------- ------- | --- ---------- ---------- ---- | ------ gDNA 2594 | K*01010101 ATGAAGTGGG CTGATCCCTG ..ATCCTTGG GATATTGTGG TCGGGAGCCC ATGGGGGAGC TCACCCAACC CCAGATTCCT CCTCTAGCCG CATCTCCTCT K*01010102 ---------- ---------- AG---T---- ---------- ---------- ---------- ---------- ---------- ---------- --------G- K*01010103 ---------- ---------- ..-------- ---------- ---------- ---------- ---------- ---------- ---------- --------G- K*01010104 ---------- ---------- AG---T---- ---------- ---------- ---------- ---------- ---------- ---------- --------G- K*0102 ---------- ---------- AG-------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- AG---T---- ---------- ---------- ---------- ---------- ---------- ---------- -----T--G- Intron 6 | Exon 7 Exon 7 | Intron 7 gDNA 2692 | | | | | K*01010101 GGGCTCTGAC CAAGTCCTGT TTTTGTTCTA CCCCAG | GCAG CGACCATGCG CAGGGTTCTG ATGTGTCTCT CACGGCTTGT AAAG | GTGAGA CACTGGGGGA K*01010102 ---------- ---------- ---------- ------ | ---- T--------- ---------- ---------- --T------- ---- | ------ AG-------- K*01010103 ---------- ---------- ---------- ------ | ---- ---------- ---------- ---------- ---------- ---- | ------ AG-------- K*01010104 ---------- ---------- ---------- ------ | ---- ---------- ---------- ---------- ---------- ---- | ------ -G-------- K*0102 ---------- ---------- ---------- ------ | ---- ---------- ---------- ---------- ---------- ---- | ------ -G-------- K*0103 ---------- ---------- ---------- ------ | ---- -A-------- ---------- ---------- ---------- ---- | ------ -G-------- gDNA 2792 | K*01010101 CCTGATGTG. GGGGGGTGTT GGGGGCAATA GTGGACGCAG CTGTGCTATG GGGTTTCTTT GAATTGGATG TATTGAGCAT GTGATGGGCT GTTTAAAGTG K*01010102 ---------T ---------- ---------- -----T---- ---------- ---------- ---------- ------A--- ---------- ---------- K*01010103 ---------T ---------- ---------- -----T---- ---------- ---------- ---------- ------A--- ---------- ---------- K*01010104 ---------T ---------- ---------- -----T---- ---------- ---------- ---------- ------A--- ---------- ---------- K*0102 ---------T ---------- ---------- -----T---- ---------- ---------- ---------- ------A--- ---------- ---------- K*0103 ---------T ---------- ---------- -----T---- ---------- ---------- ---------- ------A--- ---------- ---------- Intron 7 | Exon 8| 3' UTR gDNA 2891 | | | | | K*01010101 TCACCCCTCA CTGTGACGGA TATGAATTTG TTCATGAATA TTTTATTTTA TAG | TGTGA | GA CAGCTGCCTT GTGTGGGACT GAGAGGCAAG ATTTGTTCAC K*01010102 ---T------ ---------- ---------- ---------- ---------- --- | ----- | -- ---------- ---------- ---------- ---------- K*01010103 ---T------ ---------- ---------- ---------- ---------- --- | ----- | -- ---------- ---------- ---------- ---------- K*01010104 ---T------ ---------- ---------- ---------- ---------- --- | ----- | -- ---------- ---------- ---------- ---------- K*0102 ---T------ ---------- ---------- ---------- ---------- --- | ----- | -- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- --- | ----- | -- ---------- C--------- ---------- ---------- gDNA 2991 | K*01010101 GCCTTCCCTT TGTGACTTCA AAAACCCTGA CTCTCTTTCT GCAAAGGCAC CTGAATGTGC CTGTGTTCCT GTAGGCATAA TATGAGGAGG TGGGGAGACC K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ---------- ---A------ ---------- ---------- ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 3091 | K*01010101 AACCCACCCC CATGTCCACC ATGACCCTCT TCCCTCATGC TGACCTGTGT TCCGTCTCCA ATAATTAATC ATTCCTGCTC CATAGAGGTG AGGCTGAGAT K*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ---------- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ---------- K*01010104 ---------- ---------- ---------- ---------- ---------- ---C------ ---------- ---------- ---------- ---------- K*0102 ---------- ---------- ----T----- ---------- ---------- ---C------ ---------- ---------- ---------- ---------- K*0103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ------C--- ---------- gDNA 3191 | K*01010101 GTCTCCATCT CTGTCTCAAC TTTATGTGCA CTGAGCTGTA ACTTCTTACT TCCCTATTAA AA K*01010102 ---------- --A------- ---------- ---------- ---------- ---------- -- K*01010103 ---------- ---------- ---------- ---------- ---------- ---------- -- K*01010104 ---------- ---------- ---------- ---------- ---------- ---------- -- K*0102 ---------- ---------- ---------- ---------- ---------- ---------- -- K*0103 ---------- ---------- ---------- ---------- ---------- ---T------ --