# file: HFE_nuc.txt # date: 2024-04-10 # version: IPD-IMGT/HLA 3.56.0 # origin: https://github.com/ANHIG/IMGTHLA/blob/Latest/alignments/HFE_nuc.txt # repository: https://raw.githubusercontent.com/ANHIG/IMGTHLA/Latest/alignments/HFE_nuc.txt # author: Steven G. E. Marsh (steven.marsh@ucl.ac.uk) cDNA 1 AA codon -25 | HFE*001:01:01 ATG GGC CCG CGA GCC AGG CCG GCG CTT CTC CTC CTG ATG CTT TTG CAG ACC GCG GTC CTG CAG GGG CGC TTG CTG HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** HFE*003 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** HFE*004 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** cDNA 76 AA codon 1 | HFE*001:01:01 C|GT TCA CAC TCT CTG CAC TAC CTC TTC ATG GGT GCC TCA GAG CAG GAC CTT GGT CTT TCC TTG TTT GAA GCT TTG HFE*001:01:02 -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 *|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 *|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 *|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 151 AA codon 26 | HFE*001:01:01 GGC TAC GTG GAT GAC CAG CTG TTC GTG TTC TAT GAT CAT GAG AGT CGC CGT GTG GAG CCC CGA ACT CCA TGG GTT HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- G-- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- T-- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 226 AA codon 51 | HFE*001:01:01 TCC AGT AGA ATT TCA AGC CAG ATG TGG CTG CAG CTG AGT CAG AGT CTG AAA GGG TGG GAT CAC ATG TTC ACT GTT HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 301 AA codon 76 | HFE*001:01:01 GAC TTC TGG ACT ATT ATG GAA AAT CAC AAC CAC AGC AAG G|AG TCC CAC ACC CTG CAG GTC ATC CTG GGC TGT GAA HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- cDNA 376 AA codon 101 | HFE*001:01:01 ATG CAA GAA GAC AAC AGT ACC GAG GGC TAC TGG AAG TAC GGG TAT GAT GGG CAG GAC CAC CTT GAA TTC TGC CCT HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 451 AA codon 126 | HFE*001:01:01 GAC ACA CTG GAT TGG AGA GCA GCA GAA CCC AGG GCC TGG CCC ACC AAG CTG GAG TGG GAA AGG CAC AAG ATT CGG HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 526 AA codon 151 | HFE*001:01:01 GCC AGG CAG AAC AGG GCC TAC CTG GAG AGG GAC TGC CCT GCA CAG CTG CAG CAG TTG CTG GAG CTG GGG AGA GGT HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 601 AA codon 176 | HFE*001:01:01 GTT TTG GAC CAA CAA G|TG CCT CCT TTG GTG AAG GTG ACA CAT CAT GTG ACC TCT TCA GTG ACC ACT CTA CGG TGT HFE*001:01:02 --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 676 AA codon 201 | HFE*001:01:01 CGG GCC TTG AAC TAC TAC CCC CAG AAC ATC ACC ATG AAG TGG CTG AAG GAT AAG CAG CCA ATG GAT GCC AAG GAG HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 751 AA codon 226 | HFE*001:01:01 TTC GAA CCT AAA GAC GTA TTG CCC AAT GGG GAT GGG ACC TAC CAG GGC TGG ATA ACC TTG GCT GTA CCC CCT GGG HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 826 AA codon 251 | HFE*001:01:01 GAA GAG CAG AGA TAT ACG TGC CAG GTG GAG CAC CCA GGC CTG GAT CAG CCC CTC ATT GTG ATC TGG G|AG CCC TCA HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- HFE*002 --- --- --- --- --- --- -A- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -|-- --- --- cDNA 901 AA codon 276 | HFE*001:01:01 CCG TCT GGC ACC CTA GTC ATT GGA GTC ATC AGT GGA ATT GCT GTT TTT GTC GTC ATC TTG TTC ATT GGA ATT TTG HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*003 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*004 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- cDNA 976 AA codon 301 | HFE*001:01:01 TTC ATA ATA TTA AGG AAG AGG CAG GGT TCA A|GA GGA GCC ATG GGG CAC TAC GTC TTA GCT GAA CGT GAG TGA HFE*001:01:02 --- --- --- --- --- --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*001:01:03 --- --- --- --- --- --- --- --- --- --- -|-- --- --- --- --- --- --- --- --- --- --- --- --- --- HFE*002 --- --- --- --- --- --- --- --- --- --- -|** *** *** *** *** *** *** *** *** *** *** *** *** *** HFE*003 --- --- --- --- --- --- --- --- --- --- -|** *** *** *** *** *** *** *** *** *** *** *** *** *** HFE*004 --- --- --- --- --- --- --- --- --- --- -|** *** *** *** *** *** *** *** *** *** *** *** *** *** Please see http://hla.alleles.org/terms.html for terms of use.