HLADB-2.28.0-January 2010
HLA-F Protein Sequence Alignments
Sequences Aligned: 15 January 2010
Steven G. E. Marsh, Anthony Nolan Research Institute.


Prot. Pos.        -30        -20        -10        
F*01010101                 M APRSLLLLLS GALALTDTWA 
F*01010102                 - ---------- ---------- 
F*01010103                 - ---------- ---------- 
F*01010104                 - ---------- ---------- 
F*01010105                 - ---------- ---------- 
F*01010106                 - ---------- ---------- 
F*01010107                 - ---------- ---------- 
F*01010108                 - ---------- ---------- 
F*01010201                 - ---------- ---------- 
F*01010202                 - ---------- ---------- 
F*01010203                 - ---------- ---------- 
F*01010204                 - ---------- ---------- 
F*01010205                 - ---------- ---------- 
F*01010301                 - ---------- ---------- 
F*01010302                 - ---------- ---------- 
F*01010303                 - ---------- ---------- 
F*01010304                 - ---------- ---------- 
F*0102                     - ---------- -V-------- 
F*01030101                 - ---------- ---------- 
F*01030102                 - ---------- ---------- 
F*0104                     - ---------- ---------- 

Prot. Pos.                10         20         30         40         50         60         70         80         90        100 
F*01010101        GSHSLRYFST AVSRPGRGEP RYIAVEYVDD TQFLRFDSDA AIPRMEPREP WVEQEGPQYW EWTTGYAKAN AQTDRVALRN LLRRYNQSEA GSHTLQGMNG 
F*01010102        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010103        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010104        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010105        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010106        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010107        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010108        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010201        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010202        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010203        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010204        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010205        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010301        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010302        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010303        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010304        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*0102            ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01030101        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01030102        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*0104            ---------- ---------- ---------- ---------- ---------Q ---------- ---------- ---------- ---------- ---------- 

Prot. Pos.               110        120        130        140        150        160        170        180        190        200 
F*01010101        CDMGPDGRLL RGYHQHAYDG KDYISLNEDL RSWTAADTVA QITQRFYEAE EYAEEFRTYL EGECLELLRR YLENGKETLQ RADPPKAHVA HHPISDHEAT 
F*01010102        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010103        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010104        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010105        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010106        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010107        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010108        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010201        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010202        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010203        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010204        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010205        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010301        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010302        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010303        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010304        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*0102            ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01030101        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01030102        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*0104            ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 

Prot. Pos.               210        220        230        240        250        260        270        280        290        300 
F*01010101        LRCWALGFYP AEITLTWQRD GEEQTQDTEL VETRPAGDGT FQKWAAVVVP SGEEQRYTCH VQHEGLPQPL ILRWEQSPQP TIPIVGIVAG LVVLGAVVTG 
F*01010102        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010103        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010104        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010105        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010106        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010107        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010108        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010201        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010202        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010203        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010204        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010205        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010301        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010302        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010303        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01010304        ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*0102            ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 
F*01030101        ---------- ---------- ---------- ---------- ---------- P--------- ---------- ---------- ---------- ---------- 
F*01030102        ---------- ---------- ---------- ---------- ---------- P--------- ---------- ---------- ---------- ---------- 
F*0104            ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- 

Prot. Pos.               310        320        330        340        350      
F*01010101        AVVAAVMWRK KSSDRNRGSY SQAAVTDSAQ GSGVSLTANK V      
F*01010102        ---------- ---------- ---------- ---------- -      
F*01010103        ---------- ---------- ---------- ---------- -      
F*01010104        ---------- ---------- ---------- ---------- -      
F*01010105        ---------- ---------- ---------- ---------- -      
F*01010106        ---------- ---------- ---------- ---------- -      
F*01010107        ---------- ---------- ---------- ---------- -      
F*01010108        ---------- ---------- ---------- ---------- -      
F*01010201        ---------- ---------- ---------- ---------- -      
F*01010202        ---------- ---------- ---------- ---------- -      
F*01010203        ---------- ---------- ---------- ---------- -      
F*01010204        ---------- ---------- ---------- ---------- -      
F*01010205        ---------- ---------- ---------- ---------- -      
F*01010301        ---------- ---------- ---------- ---------- -      
F*01010302        ---------- ---------- ---------- ---------- -      
F*01010303        ---------- ---------- ---------- ---------- -      
F*01010304        ---------- ---------- ---------- ---------- -      
F*0102            ---------- ---------- ---------- ---------- -      
F*01030101        ---------- ---------- ---------- ---------- -      
F*01030102        ---------- ---------- ---------- ---------- -      
F*0104            ---------- ---------- ---------- ---------- -