HLADB-2.28.0-January 2010 HLA-E Genomic Nucleotide Sequence Alignments Sequences Aligned: 15 January 2010 Steven GE Marsh, Anthony Nolan Research Institute. 5' UTR gDNA -300 | E*01010101 CAAAGTGCTG AGATTACAGG CGTGAGCCAC CGCGCCCAGC CAGGACTAAT TTCTAAGAGT GTGCAGAGAT ACCGAAACCT AAAAGTTTAA GAACTGCTGA E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ********** ********** ********** ********** ********** ********** ********** ********** ********** ********** E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA -200 | E*01010101 TTGCTGGGAA ACTCTGCAGT TTCCCGTTCC TCTCGTAACC TGGTCATGTG TCCTTCTTCC TGGATACTCA TGACGCAGAC TCAGTTCTCA TTCCCAATGG E*01010102 ---------- ---..----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ********** ********** ********** ********** ********** ********** ********** ********** ********** ********** E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA -100 | E*01010101 GTGTCGGGTT TCTAGAGAAG CCAATCAGCG TCGCCACGAC TCCCGACTAT AAAGTCCCCA TCCGGACTCA AGAAGTTCTC AGGACTCAGA GGCTGGGATC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ********** ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- | Exon 1 Exon 1 | Intron 1 gDNA | 1 | | | E*01010101 | ATGGTAGATG GAACCCTCCT TTTACTCCTC TCGGAGGCCC TGGCCCTTAC CCAGACCTGG GCGG | GTGAGT GCGGGGTCGG GATGGAAACG GCCTCTACCG E*01010102 | ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*01010103 | ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*01030101 | ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*01030102 | ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*010302 | ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*010304 | ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- Intron 1 | Exon 2 gDNA 101 | | | E*01010101 GGAGTAGAGA GGGGCCGGCC CGGCGGGGGC GAAGGACTCG GGGAGCCGCG CCGGGAGGAG GGTCGGGCCG ATCTCAGCCC CTCCTCGCCC CCAG | GCTCCC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ gDNA 201 | E*01010101 ACTCCTTGAA GTATTTCCAC ACTTCCGTGT CCCGGCCCGG CCGCGGGGAG CCCCGCTTCA TCTCTGTGGG CTACGTGGAC GACACCCAGT TCGTGCGCTT E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 301 | E*01010101 CGACAACGAC GCCGCGAGTC CGAGGATGGT GCCGCGGGCG CCGTGGATGG AGCAGGAGGG GTCAGAGTAT TGGGACCGGG AGACACGGAG CGCCAGGGAC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Exon 2 | Intron 2 gDNA 401 | | | E*01010101 ACCGCACAGA TTTTCCGAGT GAACCTGCGG ACGCTGCGCG GCTACTACAA TCAGAGCGAG GCCG | GTGAGT GACCCCGGCC AGGGGAGCAG GTCACGACCC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*010302 ---------- ---------- ---T------ ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- E*010304 ---------- ---------- ---T------ ---------- ---------- ---------- ---- | ------ ---------- ---------- ---------- gDNA 501 | E*01010101 CTCCCCATCC CCCACGGACG GCGCGGGTCC CCTCGAATCT TCGGGTCCCA GATTCACCCC AAGGCTGCGG AACCCGCCCA GACCCTAGAC CGGGGAGAGT E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 601 | E*01010101 CTCAGGCGCC TTTACCCGGT TCTTTTTCAG TTTAGGCCAA AATGCCCACA GGGTGGTGGC GACGGGGGCG GGGCTTGGTG GGCGGGACTG ACTAAGGGGC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 2 | Exon 3 gDNA 701 | | | E*01010101 GGGGCCAG | GG TCTCACACCC TGCAGTGGAT GCATGGCTGC GAGCTGGGGC CCGACAGGCG CTTCCTCCGC GGGTATGAAC AGTTCGCCTA CGACGGCAAG E*01010102 -------- | -- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 -------- | -- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 -------- | -- ---------- ---------- ---------- ---------- -----G---- ---------- ---------- ---------- ---------- E*01030102 -------- | -- ---------- ---------- ---------- ---------- -----G---- ---------- ---------- ---------- ---------- E*010302 -------- | -- ---------- ---------- ---------- ---------- -----G---- ---------- ---------- ---------- ---------- E*010304 -------- | -- ---------- ---------- ---------- ---------- -----G---- ---------- ---------- ---------- ---------- gDNA 801 | E*01010101 GATTATCTCA CCCTGAATGA GGACCTGCGC TCCTGGACCG CGGTGGACAC GGCGGCTCAG ATCTCCGAGC AAAAGTCAAA TGATGCCTCT GAGGCGGAGC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Exon 3 | Intron 3 gDNA 901 | | | E*01010101 ACCAGAGAGC CTACCTGGAA GACACATGCG TGGAGTGGCT CCACAAATAC CTGGAGAAGG GGAAGGAGAC GCTGCTTCAC CTGG | GTAAGA GGGTCCACAG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---- | ------ ---------- gDNA 1001 | E*01010101 GGCTACTCTC CCATCTCCTT CTTGGGCTAG GACTGTGCCC ACAGCTGACA GACCTCAAAC AGTAGAAGAA ACAGGGATGG AGGCCAGAAT ACCACTCCTC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1101 | E*01010101 CCTTGGATCA GGAGAGGGAG CTGTCACCTG AGGTACAGGA GATCCTATAC CACAGAGTGA CTCTCTTAAA GGGCCAGACC TCTCTCAGGG GCAATTAAGG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1201 | E*01010101 AATCTAGTCT CGCTGGAGAT TCCATCCTTC AGATGAACTG ATGAGCAGTT CTCTTTGACT CCCAGTATTA GGAATCACGG GGGAGTTTCT CTCGTGCCTG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1301 | E*01010101 ATTCTCAGCC CCACACCAAG AGTTTTTGGA GGTCTGACTC CAGCTTTTCT CAGTCACTCA GCATCCACAC AGGCCAGGAC CAGAAATCCC TTTTCACCTT E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1401 | E*01010101 CTACCCTGGG CTAGCTCATC CCGATTCTAG AACTTTCCAA GGAATAAGAG GCTATCCCAG ATCCCTAAGT CCAGGCTGGT GTCAAGGTTT TGTCCTCTTC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 1501 | E*01010101 TCCTACTATA ATTGTCCTCT TCCTTCTCAG GATGGTCACA TGGGTGCTGC TGGAGTGTCC CATGAGAGAT ACAAAGTGCC TGAATTTTCT GACTCTTCCC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 3 | Exon 4 gDNA 1601 | | E*01010101 CTCAG | AGCCC CCAAAGACAC ACGTGACTCA CCACCCCATC TCTGACCATG AGGCCACCCT GAGGTGCTGG GCCCTGGGCT TCTACCCTGC GGAGATCACA E*01010102 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- A--------- gDNA 1701 | E*01010101 CTGACCTGGC AGCAGGATGG GGAGGGCCAT ACCCAGGACA CGGAGCTCGT GGAGACCAGG CCTGCAGGGG ATGGAACCTT CCAGAAGTGG GCAGCTGTGG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Exon 4 | Intron 4 gDNA 1801 | | | E*01010101 TGGTGCCTTC TGGAGAGGAG CAGAGATACA CGTGCCATGT GCAGCATGAG GGGCTACCCG AGCCCGTCAC CCTGAGATGG A | GTAAGGAGG GGGATGGGAG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- - | --------- ---------- gDNA 1901 | E*01010101 GTCATGTCTC TTCTCAGGGA AAGCGGGAGC CCTTCTGGAG CCCTTCCGCA GGGTCAGGGC TGAGGCCTGG GGGTCAGGGC CCCTTACGTT CCCCTCTTTT E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 4 | Exon 5 gDNA 2001 | | | E*01010101 CCCAG | AGCCG GCTTCCCAGC CCACCATCCC CATCGTGGGC ATCATTGCTG GCCTGGTTCT CCTTGGATCT GTGGTCTCTG GAGCTGTGGT TGCTGCTGTG E*01010102 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Exon 5 | Intron 5 gDNA 2101 | | | E*01010101 ATATGGAGGA AGAAGAGCTC AG | GTGGGGAA GGGAGAAGGG TGGGGTCTGA GTTTTCTTGT CCCACTGGGT GTTTCAAGCC CTAGGTAAAA GTGTGTCCTG E*01010102 ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2201 | E*01010101 CCTCGTTACT GGGAAGCACC ATCCACACAC ACGAGCCTAC CCAGCCTGGG GCCCTGTGTG CCAGCACCTA CTCTTTTTTT TTGAGACGGA GTCTTGGCTC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2301 | E*01010101 TGTCACCCAG GCTGGAGTGC AATGGCGTGG TTTCAGCTCA CTGCAACCTC CGCCTCCCAG GTTCAAGCAA TTCTCCTGCC TCAGCCTCCC TAGTAGCTGG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2401 | E*01010101 GACTACACAT GCGTGCCACC ACACCTGGCT AATTTTTTTT TTTGTATTTT TAGTGGAGAT GGGGTTTCAC TATGTTGGCC AGGCTGGTCT CGAACTCCTG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2501 | E*01010101 ACTTTGTGAT CTGCCTGCCT CGGCCTCCCA AAGTGCTGGG ATTACAGTCG TGAGCCACCG CACCCAGCCG CACCTACTCT TTTGTAAAGC ACCTGTGACA E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2601 | E*01010101 ATGAAGGACA GATTTATCAC CTTGACGATT GTGGTGATGG GGACCTGATC CCAGCAGTCA CAGGTCACAG GGGAAGGTCC CTGCTGAAGA CAGACCTCAG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ------A--- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 2701 | E*01010101 AAGGGCAGTT GATCCAGGAC CCACACCTGC TTTCTTCACG TTTCCTGATC CTGCCCTGGG TCTGCAGTCA CAGTTCAGGA AACTTCTCTG GGATCCAAAA E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 5 | Exon 6 gDNA 2801 | | | E*01010101 CTAGGAGGTT CCTCTAGGAC CTTATGGCCC TGCCTCCTCC CTGGCCCCTC ACAGGACATT TTCTTCCAAC AG | GTGGAAAA GGAGGGAGCT ACTCTAAGGC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- Exon 6 | Intron 6 gDNA 2901 | | | E*01010101 TGAGT | GTAAG TGCGGGGCGG GAGCGTGGAG GAGCTCGCCC ACCCTATAAT TCCTCCTGCA CCACATCTCC TGTGGGCTCT GACCAGGTCT TGTTTTTGTT E*01010102 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ----- | ----- ---------- ---T------ ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ----- | ----- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 6 | Exon 7 Exon 7 | Intron 7 gDNA 3001 | | | | | E*01010101 CTACCCCAG | G GAGCGACAGT GCCCAGGGGT CTGAGTCTCA CAGCTTGTAA AG | GTGAGATT CTGGGGGTCT GAAGTGGGTG GAGGGTGGGG CAGAGGGGAC E*01010102 --------- | - ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- E*01010103 --------- | - ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- E*01030101 --------- | - ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- E*01030102 --------- | - ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- E*010302 --------- | - ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- E*010304 --------- | - ---------- ---------- ---------- ---------- -- | -------- ---------- ---------- ---------- ---------- gDNA 3101 | E*01010101 AGGACTGGGT TGTGGGGATT TTTTGATTCA GAATTTTTGA GTGTGTGGTG GGCTGTTCAG AGTGTCATCA CTTACCGTGA CTGACCTGAA TTTGTTCATG E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- Intron 7 | Exon 8 | 3' UTR gDNA 3201 | | | | | E*01010101 ACTATTTTCT TCTGTAG | CCT GA | GACAGCTG CCTTGTGTGC GACTGAGATG CACAGCTGCC TTGTGTGCGA CTGAGATGCA GGATTTCCTC ACGCCTCCCC E*01010102 ---------- ------- | --- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ------- | --- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ------- | --- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ------- | --- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ------- | --- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ------- | --- -- | -------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 3301 | E*01010101 TATGTGTCTT AGGGGACTCT GGCTTCTCTT TTTGCAAGGG CCTCTGAATC TGTCTGTGTC CCTGTTAGCA CAATGTGAGG AGGTAGAGAA ACAGTCCACC E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 3401 | E*01010101 TCTGTGTCTA CCATGACCCC CTTCCTCACA CTGACCTGTG TTCCTTCCCT GTTCTCTTTT CTATTAAAAA TAAGAACCTG GGCAGAGTGC GGCAGCTCAT E*01010102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -------*** ********** E*01010103 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030101 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*01030102 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- -----***** ********** E*010302 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- E*010304 ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- ---------- gDNA 3501 | E*01010101 GCCTGTAATC CCAGCACTTA GG E*01010102 ********** ********** ** E*01010103 ---------- ---------- -- E*01030101 ---------- ---------- -- E*01030102 ********** ********** ** E*010302 ---------- ---------- -- E*010304 ---------- ---------- --