HLADB-2.28.0-January 2010 HLA-DRA Nucleotide Sequence Alignments Sequences Aligned: 15 January 2010 Steven G. E. Marsh, Anthony Nolan Research Institute. Nuc. Pos. 30 60 Prot. Pos. -20 -10 -1 DRA*0101 ATG GCC ATA AGT GGA GTC CCT GTG CTA GGA TTT TTC ATC ATA GCT GTG CTG ATG AGC GCT CAG GAA TCA TGG GCT DRA*010201 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DRA*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 90 120 150 Prot. Pos. 1 10 20 DRA*0101 ATC AAA G | AA GAA CAT GTG ATC ATC CAG GCC GAG TTC TAT CTG AAT CCT GAC CAA TCA GGC GAG TTT ATG TTT GAC DRA*010201 *** *** * | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 180 210 Prot. Pos. 30 40 50 DRA*0101 TTT GAT GGT GAT GAG ATT TTC CAT GTG GAT ATG GCA AAG AAG GAG ACG GTC TGG CGG CTT GAA GAA TTT GGA CGA DRA*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 240 270 300 Prot. Pos. 60 70 DRA*0101 TTT GCC AGC TTT GAG GCT CAA GGT GCA TTG GCC AAC ATA GCT GTG GAC AAA GCC AAC CTG GAA ATC ATG ACA AAG DRA*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 330 360 Prot. Pos. 80 90 100 DRA*0101 CGC TCC AAC TAT ACT CCG ATC ACC AAT G | TA CCT CCA GAG GTA ACT GTG CTC ACG AAC AGC CCT GTG GAA CTG AGA DRA*010201 --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 390 420 450 Prot. Pos. 110 120 DRA*0101 GAG CCC AAC GTC CTC ATC TGT TTC ATC GAC AAG TTC ACC CCA CCA GTG GTC AAT GTC ACG TGG CTT CGA AAT GGA DRA*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- --- --- --- --- --- --A --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 480 510 Prot. Pos. 130 140 150 DRA*0101 AAA CCT GTC ACC ACA GGA GTG TCA GAG ACA GTC TTC CTG CCC AGG GAA GAC CAC CTT TTC CGC AAG TTC CAC TAT DRA*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 540 570 600 Prot. Pos. 160 170 DRA*0101 CTC CCC TTC CTG CCC TCA ACT GAG GAC GTT TAC GAC TGC AGG GTG GAG CAC TGG GGC TTG GAT GAG CCT CTT CTC DRA*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 630 660 Prot. Pos. 180 190 200 DRA*0101 AAG CAC TGG G | AG TTT GAT GCT CCA AGC CCT CTC CCA GAG ACT ACA GAG AAC GTG GTG TGT GCC CTG GGC CTG ACT DRA*010201 --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 690 720 750 Prot. Pos. 210 220 DRA*0101 GTG GGT CTG GTG GGC ATC ATT ATT GGG ACC ATC TTC ATC ATC AAG GGA GTG CGC AAA AGC AAT GCA GCA GAA CGC DRA*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- T-- --- --- --- --- --- --- --- --- DRA*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- T-- --- --- --- --- --- --- --- --- Nuc. Pos. Prot. Pos. 230 DRA*0101 AGG GGG CCT CTG TAA DRA*010201 --- --- --- --- --- DRA*010202 --- --- --- --- ---