HLADB-2.28.0-January 2010 HLA-DQA1 Nucleotide Sequence Alignments Sequences Aligned: 15 January 2010 Steven G. E. Marsh, Anthony Nolan Research Institute. Nuc. Pos. 30 60 Prot. Pos. -20 -10 -1 1 DQA1*010101 ATG ATC CTA AAC AAA GCT CTG CTG CTG GGG GCC CTC GCT CTG ACC ACC GTG ATG AGC CCC TGT GGA GGT GAA GAC DQA1*010102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- --T --- --- --- --- -G- DQA1*010402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- --T --- --- --- --- -G- DQA1*0105 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- --- --- --- --- --- -G- DQA1*0106 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0107 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0201 --- --- --- --- --- --- --- A-- --- --- --- --- --C --- --- --- --- --- --- --T --- --- --- --- --- DQA1*030101 --- --- --- --- --- --- --- A-- --- --- --- --- --C --- --- --- --- --- --- --T --- --- --- --- --- DQA1*0302 --- --- --- --- --- --- --- A-- --- --- --- --- --C --- --- --- --- -C- --- --T --- --- --- --- --- DQA1*0303 --- --- --- --- --- --- --- A-- --- --- --- --- --C --- --- --- --- --- --- --T --- --- --- --- --- DQA1*040101 --- --- --- --- --- --- --- --- --- --- --- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*040102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0402 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0403N *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0404 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*050101 --- --- --- --- --- --- --- A-- --- --- --- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*050102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** --- --- DQA1*0502 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0503 --- --- --- --- --- --- --- A-- --- --- --- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0504 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0505 --- --- --- --- --- --- --- A-- --- --- A-- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0506 --- --- --- --- --- --- --- A-- --- --- --- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0507 --- --- --- --- --- --- --- A-- --- --- --- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0508 --- --- --- --- --- --- --- A-- --- --- A-- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0509 --- --- --- --- --- --- --- A-- --- --- A-- --T --C --- --- --- --- --- --- --- --- --- --- A-- --- DQA1*0510 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*060101 --- --- --- --- --- --- --- --- --- --- --- --T --C --- --- --- --- --- --- --- --- --- --- --- --- DQA1*060102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0602 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** Nuc. Pos. 90 120 150 Prot. Pos. 10 20 DQA1*010101 ATT GTG G | CT GAC CAC GTT GCC TCT TGT GGT GTA AAC TTG TAC CAG TTT TAC GGT CCC TCT GGC CAG TAC ACC CAT DQA1*010102 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- - | -- --- --T --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -T- --- --- DQA1*010401 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0105 --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 *** *** * | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0107 *** *** * | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0201 --- --- - | -- --- --- --- --- --- -AC --- --- --- --- --- --- -C- --- --- --- --- --- --- -T- --- --- DQA1*030101 --- --- - | -- --- --T --- --- --- -AC --- --- --- --- --- --- -C- --T --- --- --- --G --- --- -G- --- DQA1*0302 --- --- - | -- --- --T --- --- --- -AC --- --- --- --- --- --- -C- --T --- --- --- --G --- --- -G- --- DQA1*0303 --- --- - | -- --- --T --- --- --- -AC --- --- --- --- --- --- -C- --T --- --- --- --G --- --- -G- --- DQA1*040101 --- --- - | -- --- --T --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*040102 *** *** * | -- --- --T --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0402 *** *** * | -- --- --T --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0403N *** *** * | -- --- --T --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0404 *** *** * | -- --- --T --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*050101 --- --- - | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*050102 --- --- - | -- --- --- --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0502 *** *** * | ** *** *** *** *** *** *** --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0503 --- --- - | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0504 *** *** * | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- -T- --- --- --- --- --- --- DQA1*0505 --- --- - | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0506 --- --- - | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0507 --- --- - | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0508 --- --- - | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0509 --- --- - | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*0510 *** *** * | -- --- --- --C --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- --- --- --- DQA1*060101 --- --- - | -- --- --T --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- -T- --- --- DQA1*060102 *** *** * | ** *** *** *** *** *** *** --- --- --- --- --- --- -C- --- --- --- --- --- --- -T- --- --- DQA1*0602 *** *** * | -- --- --T --- --- --- -A- --- --- --- --- --- --- -C- --- --- --- --- --- --- -T- --- --- Nuc. Pos. 180 210 Prot. Pos. 30 40 50 DQA1*010101 GAA TTT GAT GGA GAT GAG GAG TTC TAC GTG GAC CTG GAG AGG AAG GAG ACT GCC TGG CGG TGG CCT GAG TTC AGC DQA1*010102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- --- --- C-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- C-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- C-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- --- --- --- --- C-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- --- --- --- --- C-- --- --- --- --- --- --- -A- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0105 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 --- --- --- --- --- --- C-- --- --- --- --- --- --- --- --- --- G-- --- --- --- --- --- --- --- --- DQA1*0107 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0201 --- --- --- --- --C --- --- --- --T --- --- --- --- --- --- --- --- -T- --- AA- -T- --- CT- --- CA- DQA1*030101 --- --- --- --- --C --- --- --- --T --- --- --- --- --- --- --- --- -T- --- -A- -T- --- CT- --- C-- DQA1*0302 --- --- --- --- --C --- --- --- --T --- --- --- --- --- --- --- --- -T- --- -A- -T- --- CT- --- C-- DQA1*0303 --- --- --- --- --C --- --- --- --T --- --- --- --- --- --- --- --- -T- --- -A- -T- --- CT- --- C-- DQA1*040101 --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*040102 --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0402 --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0403N --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0404 --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*050101 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*050102 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0502 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0503 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0504 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0505 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0506 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0507 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0508 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0509 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0510 --- --- --- --- --- --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*060101 --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*060102 --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A DQA1*0602 --- --- --- --- --C --- C-- --- --- --- --- --- -G- --- --- --- --- -T- --- T-T -T- --- -TT C-- --A Nuc. Pos. 240 270 300 Prot. Pos. 60 70 DQA1*010101 AAA TTT GGA GGT TTT GAC CCG CAG GGT GCA CTG AGA AAC ATG GCT GTG GCA AAA CAC AAC TTG AAC ATC ATG ATT DQA1*010102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0105 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0107 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0201 -G- C-- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- CT- --- --T --- --- --- --- C-- --- DQA1*030101 -G- --- A-- A-A --- --- --- --A TT- --- --- -C- --- --C --- --- CT- --- --T --- --- --- --- G-- --- DQA1*0302 -G- --- A-- A-A --- --- --- --A TT- --- --- -C- --- --C --- --- CT- --- --T --- --- --- --- G-- --- DQA1*0303 -G- --- A-- A-A --- --- --- --A TT- --- --- -C- --- --C --- --- CT- --- --T --- --- --- --- G-- --- DQA1*040101 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- A-- --- --- --- --- --- --- C-- --- DQA1*040102 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- A-- --- --- --- --- --- --- C-- --- DQA1*0402 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- A-- --- --- --- --- --- --- C-- --- DQA1*0403N T-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- A-- --- --- --- --- --- --- C-- --- DQA1*0404 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- A-- --- --- --- --- --- --- C-- --- DQA1*050101 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*050102 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0502 C-- --- A-- ... --- --- -G- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0503 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0504 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0505 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0506 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0507 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0508 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0509 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- --- DQA1*0510 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --C CT- --- --T --- --- --- -GT C-- G-- DQA1*060101 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- A-- --- --- --- --- --- --- C-- --- DQA1*060102 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --C --- A-- --- --- --- --- --- --- C-- --- DQA1*0602 C-- --- A-- ... --- --- --- --A TT- --- --- -C- --- --C --- --- A-- --- --- --- --- --- --- C-- --- Nuc. Pos. 330 360 Prot. Pos. 80 90 100 DQA1*010101 AAA CGC TAC AAC TCT ACC GCT GCT ACC AAT G | AG GTT CCT GAG GTC ACA GTG TTT TCC AAG TCT CCC GTG ACA CTG DQA1*010102 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0105 --- --- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 --- --- --- --- --- --- --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0107 --- T-- --- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0201 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*030101 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0302 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0303 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*040101 --- --- -C- --- --- --T --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --G --- DQA1*040102 --- --- -C- --- --- --T --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --T --- --G --- DQA1*0402 --- --- -C- --- --- --T --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --G --- DQA1*0403N --- --- -C- --- --- --T --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0404 --- --- -C- --- --- --T --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --G --- DQA1*050101 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*050102 --- --- -C- --- --- --- --- --- --- --- * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0502 --- --- -C- --- --- --- --- --- --- *** * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0503 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0504 --- --- -C- --- --- --- --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0505 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0506 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- G-- DQA1*0507 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0508 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0509 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0510 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*060101 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --G --- DQA1*060102 --- --- -C- --- --- --- --- --- --- --- - | -* *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0602 --- --- -C- --- --- --- --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --G --- Nuc. Pos. 390 420 450 Prot. Pos. 110 120 DQA1*010101 GGT CAG CCC AAC ACC CTC ATT TGT CTT GTG GAC AAC ATC TTT CCT CCT GTG GTC AAC ATC ACA TGG CTG AGC AAT DQA1*010102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --C --- --- --- --- DQA1*010204 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --C --- --- --- --- DQA1*0105 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0107 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0201 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --C --- --- --- --- DQA1*030101 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --C --- --- --- --- DQA1*0302 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --C --- --- --- --- DQA1*0303 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --C --- --- --- --- DQA1*040101 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*040102 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0402 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0403N *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0404 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*050101 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*050102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0502 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0503 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0504 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0505 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0506 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0507 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0508 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0509 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0510 --- --- --- --- -T- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*060101 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*060102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0602 --- --- --- --- --- --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 480 510 Prot. Pos. 130 140 150 DQA1*010101 GGG CAG TCA GTC ACA GAA GGT GTT TCT GAG ACC AGC TTC CTC TCC AAG AGT GAT CAT TCC TTC TTC AAG ATC AGT DQA1*010102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --C G-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0105 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0107 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0201 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*030101 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0302 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0303 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*040101 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*040102 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0402 --- --C --- --- --- --- --- --- --- --- -T- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0403N *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0404 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*050101 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*050102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0502 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0503 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0504 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0505 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0506 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0507 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0508 --- --C --- --- --- --- --- --- --- --- --- -T- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0509 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0510 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*060101 --- --C --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*060102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0602 --- --C --- --- --- --- --- --- --- --- --- C-- --- --- --- --- --- --- --- --- --- --- --- --- --- Nuc. Pos. 540 570 600 Prot. Pos. 160 170 DQA1*010101 TAC CTC ACC TTC CTC CCT TCT GCT GAT GAG ATT TAT GAC TGC AAG GTG GAG CAC TGG GGC CTG GAC CAG CCT CTT DQA1*010102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0105 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0107 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0201 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T G-- --- --- DQA1*030101 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T G-- --- --- DQA1*0302 --- --- --- --- --- --- --- -A- --- --- --- --- --- --- --- --- --- --- --- --- --- --T G-- --- --- DQA1*0303 --- --- --- --- --- --- --- -A- --- --- --- --- --- --- --- --- --- --- --- --- --- --T G-- --- --- DQA1*040101 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-- --- --- DQA1*040102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-- --- --- DQA1*0402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-- --- --- DQA1*0403N *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0404 C-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-- --- --- DQA1*050101 --- --- --- C-- --- --- --- --- --G --- -G- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- DQA1*050102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0502 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0503 --- --- --- C-- --- --- --- T-- --G --- -G- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- DQA1*0504 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0505 --- --- --- C-- --- --- --- --- --G --- -G- --- --- --- --- --- --- --- --- --A --- --- A-- --- --- DQA1*0506 --- --- --- C-- --- --- --- T-- --G --- -G- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- DQA1*0507 --- --- --- C-- --- --- --- T-- --G --- -G- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- DQA1*0508 --- --- --- C-- --- --- --- --- --G --- -G- --- --- --- --- --- --- --- --- --A --- --- A-- --- --- DQA1*0509 --- --- --- C-- --- --- --- --- --G --- -G- --- --- --- --- --- --- --- --- --A --- --- A-- --- --- DQA1*0510 --- --- --- C-- --- --- --- --- --G --- -G- --- --- --- --- --- --- --- --- --A --- --- A-- --- --- DQA1*060101 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-- --- --- DQA1*060102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0602 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- G-- --- --- Nuc. Pos. 630 660 Prot. Pos. 180 190 200 DQA1*010101 CTG AAA CAC TGG G | AG CCT GAG ATT CCA GCC CCT ATG TCA GAG CTC ACA GAG ACT GTG GTC TGC GCC CTG GGG TTG DQA1*010102 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T --- --- --- --- DQA1*010202 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T --- --- --- --- DQA1*010203 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T --- --- --- --- DQA1*010204 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T --- --- --- --- DQA1*0103 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --T --- --- --- --- DQA1*010401 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- --- DQA1*010402 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- A-- --- --- --- DQA1*0105 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 *** *** *** *** * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0107 --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0201 --- --- --- --- - | -- --- --- --- --- --A --- --- --- --- --- --- --- --- --- --- --T --- --- --- --- DQA1*030101 --- --- --- --- - | -- --- --- --- --- A-A --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0302 --- --- --- --- - | -- --- --- --- --- A-A --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0303 --- --- --- --- - | -- --- --- --- --- A-A --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*040101 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --A --- DQA1*040102 --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0402 --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0403N *** *** *** *** * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0404 --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*050101 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --A --- DQA1*050102 *** *** *** *** * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0502 *** *** *** *** * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0503 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --A --- DQA1*0504 *** *** *** *** * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0505 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0506 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --A --- DQA1*0507 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --A --- DQA1*0508 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0509 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0510 --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*060101 --- --- --- --- - | -- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --A --- DQA1*060102 *** *** *** *** * | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0602 --- --- --- --- - | ** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** Nuc. Pos. 690 720 750 Prot. Pos. 210 220 DQA1*010101 TCT GTG GGC CTC GTG GGC ATT GTG GTG GGC ACT GTC TTC ATC ATC CAA GGC CTG CGT TCA GTT GGT GCT TCC AGA DQA1*010102 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010201 --- --- --- --- A-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010202 --- --- --- --- A-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010203 --- --- --- --- A-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010204 --- --- --- --- A-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0103 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010401 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0105 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- DQA1*0106 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0107 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0201 --- --- --- --- --- --- --- --- --- --G --C --- --G --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*030101 --- --- --- --- --- --- --- --- --- --G --C --- --G --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0302 --- --- --- --- --- --- --- --- --- --G --C --- --G --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0303 --- --- --- --- --- --- --- --- --- --G --C --- --G --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*040101 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*040102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0402 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0403N *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0404 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*050101 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*050102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0502 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0503 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0504 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0505 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0506 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0507 --- --- --- --- --- T-- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0508 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0509 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*0510 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*060101 --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- -G- --- --- --- --- --- --- --- --- --- DQA1*060102 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** DQA1*0602 *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** Nuc. Pos. Prot. Pos. 230 DQA1*010101 CAC CAA GGG CCA TTG TGA DQA1*010102 --- --G --- --- --- --- DQA1*010201 --- --- --- --- --- --- DQA1*010202 --- --- --- --- --- --- DQA1*010203 --- --- --- --- --- --- DQA1*010204 --- --- --- --- --- --- DQA1*0103 --- --- --- --C --- --- DQA1*010401 --- --- --- --- --- --- DQA1*010402 --- --- --- --- --- --- DQA1*0105 *** *** *** *** *** *** DQA1*0106 *** *** *** *** *** *** DQA1*0107 *** *** *** *** *** *** DQA1*0201 --- --- --- --C --- --- DQA1*030101 --- --- --- --C --- --- DQA1*0302 --- --- --- --C --- --- DQA1*0303 --- --- --- --C --- --- DQA1*040101 --- --- --- --C --- --- DQA1*040102 *** *** *** *** *** *** DQA1*0402 *** *** *** *** *** *** DQA1*0403N *** *** *** *** *** *** DQA1*0404 *** *** *** *** *** *** DQA1*050101 --- --- --- --C --- --- DQA1*050102 *** *** *** *** *** *** DQA1*0502 *** *** *** *** *** *** DQA1*0503 --- --- --- --C --- --- DQA1*0504 *** *** *** *** *** *** DQA1*0505 --- --- --- --C --- --- DQA1*0506 --- --- --- --C --- --- DQA1*0507 --- --- --- --C --- --- DQA1*0508 --- --- --- --C --- --- DQA1*0509 --- --- --- --C --- --- DQA1*0510 *** *** *** *** *** *** DQA1*060101 --- --- --- --C --- --- DQA1*060102 *** *** *** *** *** *** DQA1*0602 *** *** *** *** *** ***